Assembly of SARS-CoV-2 genomes from tiled amplicon Illumina sequencing using Geneious Prime – Geneious

SMAP design: A multiplex PCR amplicon and gRNA design tool to screen for natural and CRISPR-induced genetic variation

Frontiers Genome stability assessment of PRRS vaccine strain with new ARTIC-style sequencing protocol

Tracking cryptic SARS-CoV-2 lineages detected in NYC wastewater

Geneious de novo assembly advisor decision tree & validation table – Geneious

Coronavirus Resources

Comparison of SARS-CoV-2 whole genome sequencing using tiled amplicon enrichment and bait hybridization

Dynamic SARS-CoV-2 emergence algorithm for rationally-designed logical next-generation vaccines

Recovery of complete genome sequences of Crimean-Congo haemorrhagic fever virus (CCHFV) directly from clinical samples: A comparative study between targeted enrichment and metagenomic approaches - ScienceDirect

Genes, Free Full-Text

SARS-CoV-2 whole-genome sequencing using reverse complement PCR

An optimized, amplicon-based approach for sequencing of SARS-CoV-2 from patient samples using COVIDSeq assay on Illumina MiSeq sequencing platforms - ScienceDirect